Me alone, I prefer a M/T. Since I've been married, all our vehicles have been A/T because my wife refuses to drive stick even though she can in an emergency.
It's interesting to note that I've changed the clutch of my M/T 1991 Plymouth Laser 4 times plus other transmission work. Granted, I've abused the crap out of it. But, I haven't exactly been gentle with our A/T 1995 Ford Contour either. It's transmission is still completely original. The only maintenance work needed so far was changing the ATF regularly.
I'd much prefer if there was a M/T 2006 Sonata V6. But, the Shiftronic mode suits me just fine.